Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs62075875 chr17:76516438 G/C 9.31E-5 250 33.17 29.37 15.57 KM Plot
SARC rs62076505 chr17:45497439 A/G 9.98E-5 257 19.97 34 32.4 KM Plot
SARC rs62097055 chr18:71820020 A/C 1.11E-5 254 32.4 28.28 6.43 KM Plot
SARC rs62097056 chr18:71820112 T/C 5.28E-5 256 31.57 32.13 6.43 KM Plot
SARC rs62289166 chr4:6969163 A/G 8.62E-5 251 32.5 30.77 12.82 KM Plot
SARC rs62297086 chr4:909040 G/A 4.66E-6 248 34.02 36.67 15.93 KM Plot
SARC rs62330018 chr5:309691 C/T 3.21E-5 252 33.47 28.33 9.47 KM Plot
SARC rs62462979 chr7:134019379 G/T 2.02E-5 251 32.35 31.42 22.03 KM Plot
SARC rs6433387 chr2:173888256 C/G 0 258 1.07 20.45 33.17 KM Plot
SARC rs6446559 chr4:7011186 G/A 5.2E-5 250 12.82 30.77 32.6 KM Plot
SARC rs6464635 chr7:144688017 C/T 2.93E-14 258 1.17 25.6 32.35 KM Plot
SARC rs647986 chr1:182454717 T/C 1.86E-7 256 31.1 35.13 6.72 KM Plot
SARC rs6495535 chr15:81247455 C/T 1.92E-5 253 32.3 30.25 7.82 KM Plot
SARC rs6500619 chr16:4643452 G/A 3.86E-5 253 17.25 36.4 30.75 KM Plot
SARC rs6502911 chr17:6029947 C/T 0 258 31.57 34.08 1.07 KM Plot